This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001JC66.1

Denmark/LOC_001JC66.1/2025-02-12
S. Midgley, H. Norreskov Jensen & M. Rasmussen

Statens Serum Institut, Department of Virology & Microbiological Preparedness

Sample details

Collection date
2025-02-12
Earliest release date
2026-07-21
Sampling location
Denmark
Isolate name
DNK/EVD68/DK0202/2025

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2026-07-21
NCBI update date
2026-07-21
INSDC accession

Host

Host

Submission details

Submission ID
PZ672096.1
Submitting group
Date submitted
2026-07-30 16:01:21 UTC
Date released
2026-07-30 16:15:36 UTC

Clade

Clade EV-D68
A2/D

Genotype

Genotype
EV-D68

Alignment and QC

Total SNPs
96
Total ambiguous nucs
8
Length
596 (7.98%)

Nucleotide mutations

Mutations called relative to the AY426531.1 reference

Substitutions
  • T2220C
  • G2222A
  • C2223T
  • C2226T
  • C2228G
  • A2236G
  • T2244C
  • T2247C
  • T2250C
  • C2253T
  • A2259T
  • T2265G
  • T2266G
  • C2268T
  • T2270G
  • C2280T
  • C2281T
  • G2294A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the AY426531.1 reference

Substitutions

VP1

  • VP1:S1L
  • VP1:N2E
  • VP1:G6E
  • VP1:V13I
  • VP1:T46S
  • VP1:G76S
  • VP1:K84R
  • VP1:A92T
  • VP1:S95G
  • VP1:A96E
  • VP1:G97R
  • VP1:T98I
  • VP1:H99D
  • VP1:F103Y

VP3

  • VP3:S180N
  • VP3:A182G
  • VP3:T185A
  • VP3:C194W
  • VP3:F195V
  • VP3:M196R
  • VP3:S204K
  • VP3:D208N
  • VP3:F215V
Deletions
N/A
Insertions
N/A

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